Bioinformatics

Location

Norwegian University of Life Sciences, NMBU

Group/Department

MEMO group (Microbial Ecology and Meta-Omics)

Scientific Interests/Background

Microbiology
Microbial ecology

Specifications

Metagenomic assemblies
Predictive genome-reconstructions,
Metatranscriptomics

Contact person

Phillip Pope

Associate Professor

phil.pope@nmbu.no

Location

Akershus University Hospital

Group/Department

Department of Gastroenterology
Department of Research
Epigen

Scientific Interests/Background

IBSEN III

Materials under Investigation

Mucosal bowel biopsies
Feces

Specifications

Mothur, QIIME2
Biostatistics R

Contact person

Petr Ricanek

Senior Consultant

petr.ricanek@medisin.uio.no

Location

OUH Rikshospitalet

Group/Department

Clinical Microbiology and Microbiota Medicine

Scientific Interests/Background

Cardiovascular disease, , HIV Immunology, Gut microbiota,
Gut microbiota
Infectious diseases
HIV Immunology
Development of biomarkers

Materials under Investigation

Blood
Feces
Biopsies

Specifications

QIIME2
Metagenome HUMAnN2
METAPHLAN2
Visualization
Biostatistics
Machine learning
BioBakery-tools

Contact person

Marius Trøseid

Associate Professor

troseid@hotmail.com

Location

Cancer Registry of Norway

Group/Department

Department of Research

Scientific Interests/Background

Development of biomarkers for early detection of colon cancer

Specifications

Mothur, QIIME2
Megan/Kaiju
Biostatistics ++

Contact person

Trine Rounge

Researcher

trine.rounge@kreftregisteret.no

Location

Norwegian Institute of Public Health

Group/Department

Environmental Exposure and Epidemiology

Materials under Investigation

Epidemiological data and microbiome

Specifications

Machine Learning
ANCOM

Contact person

Merete Eggesbø

Senior Reseacher

merete.eggesbo@fhi.no

Location

OUH Rikshospitalet

Group/Department

Genomics and Metagenomics in Inflammatory Disorders

Scientific Interests/Background

Primary schlerosing cholangitis
Gut microbiota in inflammatory diseases
Autoimmunity

Materials under Investigation

Blood
Feces
Biopsies

Specifications

QIIME2
Metagenome HUMAnN2
METAPHLAN2
Visualization
Biostatistics
Machine learning
BioBakery-tools

Contact person

Johannes E. R. Hov

Professor

j.e.r.hov@medisin.uio.no